| Sample Type |
Promega |
External |
Comments |
| Bacteria |
|
|
|
| Bacillus macyae |
|
Yes |
Cells in mid- to late exponential phase were centrifuged for 20 minutes at 21,000 × g at 4°C. Santini, J.M. et al. (2004) Int. J. Syst. Evol. Microbiol. 54, 2241–4. PubMed ID #15545465. |
| E. coli K-12 derivative, MC4100 |
|
Yes |
Teresa Pellicer, M. et al. (2003) J. Bacteriol. 185, 5815–21. PubMed ID #13129953. |
| Pseudomonas aeruginosa |
|
Yes |
Zhu, H. et al. (2004) Invest. Ophthalmol. Vis. Sci. 45, 1897–903. PubMed ID #15161855. |
| Bacillus subtilis |
|
Yes |
Park, J.H. et al. (2004) J. Bacteriol. 186, 1571–3. PubMed ID #14973012. |
| Staphylococcus sp. |
|
Yes |
A modified Wizard® SV Genomic Purification System protocol was used. McDonald, R. and Hill, O. (2004) Isolation of genomic DNA from bacterial cells using the Wizard® SV Genomic DNA Purification System. eNotes |
| Enterococcus faecalis |
|
Yes |
A modified Wizard® SV Genomic Purification System protocol was used. McDonald, R. and Hill, O. (2004) Isolation of genomic DNA from bacterial cells using the Wizard® SV Genomic DNA Purification System. eNotes |
| Listeria monocytogenes |
|
Yes |
A modified Wizard® SV Genomic Purification System protocol was used. McDonald, R. and Hill, O. (2004) Isolation of genomic DNA from bacterial cells using the Wizard® SV Genomic DNA Purification System. eNotes |
| Salmonella sp. |
|
Yes |
A modified Wizard® SV Genomic Purification System protocol was used. McDonald, R. and Hill, O. (2004) Isolation of genomic DNA from bacterial cells using the Wizard® SV Genomic DNA Purification System. eNotes |
| Escherichia coli O157:H7 |
|
Yes |
A modified Wizard® SV Genomic Purification System protocol was used. McDonald, R. and Hill, O. (2004) Isolation of genomic DNA from bacterial cells using the Wizard® SV Genomic DNA Purification System. eNotes |
| Eleven Gram-negative bacterial species |
|
Yes |
Modified the eNotes protocol using the Wizard® SV Genomic Purification System to isolate bacteria as follows: The pelleted bacteria were resuspended in 400µl of enzymatic lysis solution (47mM EDTA, 25mg/ml lysozyme, 20µg/ml lysostaphin) and incubated for 2 hours at 37°C. Next, 19.2 mg/ml proteinase K was added (final concentration 0.4 mg/ml), and the mixture was incubated for 1 hour at 55°C. Finally, the Nuclei Lysis Solution and RNase Solution were added, mixed and incubated for 10 minutes at 80°C. Zucol, F. et al. (2006) J. Clin. Microbiol. 44, 2750–9. PubMed ID #16891488. |
| Eleven Gram-positive bacterial species |
|
Yes |
Modified the eNotes protocol using the Wizard® SV Genomic Purification System to isolate bacteria as follows: The pelleted bacteria were resuspended in 400µl of enzymatic lysis solution (47mM EDTA, 25mg/ml lysozyme, 20µg/ml lysostaphin) and incubated for 2 hours at 37°C. Next, 19.2mg/ml proteinase K was added (final concentration 0.4mg/ml), and the mixture was incubated for 1 hour at 55°C. Finally, the Nuclei Lysis Solution and RNase Solution were added, mixed and incubated for 10 minutes at 80°C. Zucol, F. et al. (2006) J. Clin. Microbiol. 44, 2750–9. PubMed ID #16891488. |