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LABFACT #30 |
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GST-tagged proteins can be purified from mammalian cells with reduced specificity. Since mammalian cells contain GST (1), the endogeneous GST will
compete for binding on the purification substrate such as the MagneGST™ Glutathione Particles.
1. Hayes, J.D. and Pulford, D.J. (1995) Crit. Rev. Biochem. Mol. Biol. 30, 445–600.
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LABFACT #29 |
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Bioluminescent assays can be 10- to 1,000-fold more sensitive than fluorescent assays. More information on bioluminescence vs. fluorescence.
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LABFACT #28 |
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TSAP Thermosensitive Alkaline Phosphatase (Cat.#
M9910) is effectively and irreversibly inactivated by heating at 74°C for 15 minutes. Therefore, a DNA cleanup step is not required before ligation.
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LABFACT #27 |
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To ensure efficient ligation, do not frequently freeze and thaw the Ligase 10X Buffer supplied with Promega T4 DNA Ligase. ATP is sensitive to freeze-thaw cycles. We recommend storing the buffer in small aliquots.
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LABFACT #26 |
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G418 blocks protein synthesis in mammalian cells by interfering with ribosomal function. It is an aminoglycoside, similar in function to neomycin, gentamycin and kanamycin.
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LABFACT #25 |
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When using T4 DNA Polymerase to
fill in a 5´ overhang, do not allow the
reaction to proceed more than 90 minutes. As the
dNTPs in the reaction are depleted, T4 DNA Polymerase will begin degrading the double-stranded
template.
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LABFACT #24 |
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When mixing protein-containing solutions, be sure to mix gently. Vortexing can result in protein denaturation due to exposure to oxygen at the liquid surface.
Reference: Basic Biochemical Methods (1993) Alexander, R.R. and Griffiths, J.M. John Wiley & Sons, Inc. New York.
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LABFACT #23 |
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For long-term storage of genomic DNA, keep the DNA in a buffer like TE Buffer or DNA Rehydration Solution (Cat.# A7963). Long-term storage of gDNA in water can lead to autolytic degradation. |
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LABFACT #22 |
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When fixing cells, methanol-free formaldehyde can be substituted for paraformaldehyde; both work equally well. The formaldehyde must be methanol-free, as methanol is often added to formaldehyde to prevent polymerization. |
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LABFACT #21 |
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The tetrazolium salts, MTT and MTS, are commonly used to determine viability of mammalian cells. However, these dyes can also be used to monitor viability of yeast, plant and even bacterial cells. |
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LABFACT #20 |
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Adding chloramphenicol or spectinomycin to a bacterial culture can help increase yields of low-copy-number plasmids but will not noticeably increase yields of high-copy-number plasmids. |
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LABFACT #19 |
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During an in vitro transcription reaction to generate radiolabeled RNA probes, the addition of 0.05% Tween® can help increase the activity of the RNA polymerase. |
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LABFACT #18 |
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When performing RNase
protection assays, the use of RNase ONE™ Ribonuclease
enables more accurate mapping than RNase A
and Rnase T1. RNase ONE™ Ribonuclease cleaves 3′ of any
nucleotide, while RNase A cleaves 3′ of only
C and A residues and RNase T1 cleaves 3′ of G
residues. |
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LABFACT #17 |
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Enzymes that are not heat-inactivated can be inactivated
by diethyl pyrocarbonate (DEPC) treatment. Add DEPC to a final concentration of
0.1% and incubate the reaction at 65°C for 30 minutes with the cap open during
the last 15 minutes to vent the gases. |
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LABFACT #16 |
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More restriction enzyme is
generally required to digest supercoiled DNA
than linear DNA. If you linearize supercoiled DNA
with one restriction enzyme, less of a second
restriction enzyme is required for complete
digestion. |
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LABFACT #15 |
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Plasmid DNA can be
sequenced using PCR directly from E. coli (#TM024)
or yeast colonies (Promega
Notes 44). |
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LABFACT #14 |
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When isolating plasmid from
bacterial cells for use in eukaryotic transfection
experiments, be sure to use a protocol that
limits the amount of endotoxin in the preparation.
For more information, see Technical Bulletins #TB259
and #TB314. |
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LABFACT #13 |
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When making RNase-free solutions,
do not treat Tris buffers with DEPC. The DEPC reacts
rapidly with amines. For more information on
creating an RNase-free environment see the RNA
Analysis Notebook #BR120. |
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LABFACT #12 |
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Large full-length transcripts
(27.3kb) can be produced in minutes using the T7
RiboMAX™ Express Large-Scale RNA Production System
(more...). |
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LABFACT #11 |
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New restriction enzyme
isoschizomers often are less expensive or offer
performance advantages over the classic enzymes. For
more information on the use of isoschizomers and
neoschizomers, see the Promega Notes article, "Making
the Cut...". |
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LABFACT #10 |
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The 3´ to 5´ exonuclease activity
of T4 DNA Polymerase (Cat.#
M4211, M4215) is often used to remove
single-stranded 3´ overhangs from DNA fragments.
The presence of 100μM dNTPs in the reaction
will prevent T4 DNA Polymerase from degrading
double-stranded DNA and create a blunt end. To read
more, see FAQ#025. |
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LABFACT #9 |
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Promega's Technical Manuals and
Bulletins, Product Information Sheets, and Protocol
Cards are an excellent source of technical
information and are available online at www.promega.com/tbs/. |
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LABFACT #8 |
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PCR products created using Taq,
Tth or Tfl DNA Polymerase often
have a 3´-A overhang and can be cloned
using the pGEM®-T and pGEM®-T-Easy
Vector Systems.
(from #TM042) |
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LABFACT #7 |
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The Apo-ONE™ Homogeneous
Caspase-3/7 Assay may be used with purified
enzyme preparations, cell extracts, or cultures
of adherent, suspension or primary cells.
(from #TB295) |
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For the Dual-Luciferase®
Reporter Assay System, only use Passive Lysis
Buffer since PLB is specially formulated to
minimize background autoluminescence.
(from #TM040) |
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The pGEM®-T Easy Vector
System protocol uses the 2X Rapid Ligation
Buffer. Use the appropriate volume when
setting up the ligation reaction.
(from #TM042) |
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ImProm-II™ Reverse Transcription
reaction conditions support PCR amplification. No
dilution of the cDNA is necessary. Add
heat-inactivated reverse transcription products
directly to the PCR mix.
(from #TM236) |
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DNA templates for ABI PRISM®
BigDye™ Terminator chemistry include
plasmid DNA, PCR and RT-PCR products, m13DNA or
Lambda DNA. |
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RT-PCR should be
performed in the absence as well as presence of the
reverse transcriptase, to assess DNA contamination
in the template RNA. In addition,
"no-template" negative control reactions
should always be performed. |
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We highly recommend the use
of barrier pipet tips for assembling
components for PCR or RT-PCR to prevent
contamination of reactions and reagents with
template DNA, RNA or primers. |
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