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Advances in DNA Typing: What is DNA Typing?

By Sofie Kamal, B.S.
Promega Corporation


This feature story contains 3 sections:
Promega's Decision - PowerPlex™16
- What is DNA Typing?


DNA typing is the scientific process by which normally occurring variations in DNA are detected. 2242CA.jpg Each person's DNA typing pattern is different. This property is the fundamental basis for determining whether two people are related to each other. Similarly, DNA typing has become the basis of forensic analysis, which is the matching of suspects to biological crime scene evidence. DNA typing results are used by attorneys, judges, law enforcement officials, physicians and even private individuals.

Identification and determination of paternity are the two major applications of genetic identity testing. In contrast to clinical genetics, forensic DNA typing examines the properties of noncoding loci spread over the entire human genome. Since noncoding loci are not expressed, DNA typing does not reveal any information about an individual, such as presence of a heritable genetic disease, but rather the mere identity or relatedness of the individual to another (1).

Many countries are now in the process of collecting and typing DNA from convicted offenders and storing the genotypes in centralized searchable databases. These databases will eventually include the DNA profiles of millions of individuals and will make it possible to link crime scenes to suspects. In order to standardize these databases, countries have selected standard sets of  STR (short tandem repeat) loci to use. STR loci consist of short, repetitive sequence elements 3-7 base pairs in length (2-5). These repeats are well distributed throughout the human genome and are a rich source of highly polymorphic markers, which can be detected using PCR (6-9). Alleles of STR loci are differentiated by the number of copies of the repeat sequence contained within the amplified region and are distinguished from one another using radioactive, silver stain or fluorescence detection following electrophoretic separation.

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In the United States, the FBI has established the Combined DNA Indexing System (CODIS) and identified 13 core STR loci that must be typed prior to searching or submitting samples (10-12). In Europe, ENFSI (European Network of Forensic Science Institutes) has selected seven loci, and Interpol has established a set of four loci as a pan-European standard. In Latin America, GITAD (Grupo Iberoamericano de Trabajo en Analisis de DNA) has selected six STR loci for inclusion in their database system (13).

Applications of DNA Typing

  • Paternity Testing

  • Criminal Investigation

  • Relative Identification Immigration

  • Inheritance

DNA typing technology has advanced greatly, and Promega has led the way with its Multiplex STR Systems, including the recently released PowerPlex™ 16 System. Promega has also led the way with its unprecedented decision to disclose proprietary information.  

Those who are interested in the advancements in the field of human identification will be attending the 11th International Symposium on Human Identification.

11th International Symposium on Human Identification

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Beau Rivage Resort
Biloxi, MS USA
October 10–13, 2000

  • Innovations in DNA Typing Technologies

  • DNA Databases & Their Impact on Crime

  • Case Studies Using DNA Typing to Solve Crimes

References

1. Benecke, M. (1997) Naturwissenschaften 84, 181.
2. Edwards, A. et al. (1991)  In: The Second International Symposium on Human Identification 1991, Promega Corporation, 31.
3. Edwards, A. et al. (1991) Am. J. Hum. Genet. 49, 746.
4. Edwards, A. et al. (1992) Genomics 12, 241.
5. Warne, D. et al. (1991) Nucl. Acids Res. 19, 6980.
6. Ausubel, F.M. et al. (1993) In: Current Protocols in Molecular Biology, Vol. 2, Greene Publishing Associates Inc., and John Wiley and Sons, NY.
7. Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) In: Molecular Cloning: A Laboratory Manual, Second Edition, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.
8. PCR Technology: Principles and Applications for DNA Amplification (1989) Erlich, H.A., ed., Stockton Press, New York, NY.
9. PCR Protocols: A Guide to Methods and Applications (1990) Innis, M.A. et al., eds., Academic Press, San Diego, CA.
10. Budowle, B. (1997) Forensics: Science, Evidence and Future Prospects. McLean, VA, November 17–18, 1997.
11. Moretti, T. (1998) American Academy of Forensic Sciences Annual Meeting. San Francisco, CA, February 9–14, 1998.
12. Budowle, B. (1998) 9th International Symposium on Human Identification. Orlando, FL, October 7–10, 1998.
13. Lorente, J. (1999) Profiles in DNA 3(1), 8.


PowerPlex™ 16 - Promega's Decision - What is DNA Typing?